STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000012408annotation not available (150 aa)    
Predicted Functional Partners:
Gatb
glutamyl-tRNA(Gln) amidotransferase, subunit B.
    
  0.856
Tmem109
Transmembrane protein 109.
    
  0.856
Usp30
Ubiquitin specific peptidase 30.
    
  0.686
Fkbp8
FK506 binding protein 8.
    
  0.626
Tomm20
Translocase of outer mitochondrial membrane 20.
   
 
 0.608
Tomm70a
Translocase of outer mitochondrial membrane 70A.
     
 0.585
Nup155
Nucleoporin 155.
    
  0.582
Rhot1
Ras homolog family member T1.
    
  0.579
Cfap70
Cilia and flagella associated protein 70.
    
  0.557
2700097O09Rik
RIKEN cDNA 2700097O09 gene.
   
 
 0.555
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.