STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nop9NOP9 nucleolar protein. (573 aa)    
Predicted Functional Partners:
Utp3
UTP3 small subunit processome component.
   
   0.984
Nop58
NOP58 ribonucleoprotein.
   
   0.974
Aatf
Apoptosis antagonizing transcription factor.
   
 
 0.960
Utp4
UTP4 small subunit processome component.
   
 
 0.960
ENSJJAP00000002296
annotation not available
   
 
 0.953
ENSJJAP00000023326
annotation not available
   
 
 0.953
Cebpz
CCAAT/enhancer binding protein zeta.
   
 
 0.936
Bop1
Block of proliferation 1.
   
   0.933
Ddx56
DEAD (Asp-Glu-Ala-Asp) box polypeptide 56.
   
 
 0.932
Pum3
Pumilio RNA-binding family member 3.
   
  
 0.931
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.