STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pald1Phosphatase domain containing, paladin 1. (856 aa)    
Predicted Functional Partners:
Zfp646
Zinc finger protein 646.
      
 0.570
Parp2
Poly (ADP-ribose) polymerase family, member 2.
      
 0.552
Acbd4
acyl-Coenzyme A binding domain containing 4.
      
 0.539
Chst8
Carbohydrate sulfotransferase 8.
      
 0.525
Polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
      
 0.512
Chst9
Carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9.
      
 0.482
Parp1
Poly (ADP-ribose) polymerase family, member 1.
      
 0.472
Adamts2
A disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2.
      
 0.465
Adamts3
A disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3.
      
 0.465
Upp1
Uridine phosphorylase 1.
      
 0.457
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.