Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ctnnb1 | ENSJJAP00000001398 | ENSJJAP00000013206 | ENSJJAP00000001398 | Catenin (cadherin associated protein), beta 1. | annotation not available | 0.891 |
Ctnnb1 | Ibsp | ENSJJAP00000013206 | ENSJJAP00000001098 | Catenin (cadherin associated protein), beta 1. | Integrin binding sialoprotein. | 0.407 |
Ctnnb1 | Nme8 | ENSJJAP00000013206 | ENSJJAP00000000298 | Catenin (cadherin associated protein), beta 1. | NME/NM23 family member 8. | 0.611 |
Ctnnb1 | Runx2 | ENSJJAP00000013206 | ENSJJAP00000019703 | Catenin (cadherin associated protein), beta 1. | Runt related transcription factor 2. | 0.792 |
Ctnnb1 | Sp7 | ENSJJAP00000013206 | ENSJJAP00000013156 | Catenin (cadherin associated protein), beta 1. | Sp7 transcription factor 7. | 0.578 |
Ctnnb1 | Sufu | ENSJJAP00000013206 | ENSJJAP00000002687 | Catenin (cadherin associated protein), beta 1. | SUFU negative regulator of hedgehog signaling. | 0.474 |
ENSJJAP00000001398 | Ctnnb1 | ENSJJAP00000001398 | ENSJJAP00000013206 | annotation not available | Catenin (cadherin associated protein), beta 1. | 0.891 |
ENSJJAP00000001398 | Nme8 | ENSJJAP00000001398 | ENSJJAP00000000298 | annotation not available | NME/NM23 family member 8. | 0.941 |
ENSJJAP00000001398 | Sp7 | ENSJJAP00000001398 | ENSJJAP00000013156 | annotation not available | Sp7 transcription factor 7. | 0.530 |
ENSJJAP00000011957 | ENSJJAP00000012215 | ENSJJAP00000011957 | ENSJJAP00000012215 | annotation not available | annotation not available | 0.506 |
ENSJJAP00000011957 | Nme8 | ENSJJAP00000011957 | ENSJJAP00000000298 | annotation not available | NME/NM23 family member 8. | 0.427 |
ENSJJAP00000011957 | Sp7 | ENSJJAP00000011957 | ENSJJAP00000013156 | annotation not available | Sp7 transcription factor 7. | 0.757 |
ENSJJAP00000012215 | ENSJJAP00000011957 | ENSJJAP00000012215 | ENSJJAP00000011957 | annotation not available | annotation not available | 0.506 |
ENSJJAP00000012215 | Sp7 | ENSJJAP00000012215 | ENSJJAP00000013156 | annotation not available | Sp7 transcription factor 7. | 0.510 |
Ibsp | Ctnnb1 | ENSJJAP00000001098 | ENSJJAP00000013206 | Integrin binding sialoprotein. | Catenin (cadherin associated protein), beta 1. | 0.407 |
Ibsp | Runx2 | ENSJJAP00000001098 | ENSJJAP00000019703 | Integrin binding sialoprotein. | Runt related transcription factor 2. | 0.516 |
Ibsp | Sp7 | ENSJJAP00000001098 | ENSJJAP00000013156 | Integrin binding sialoprotein. | Sp7 transcription factor 7. | 0.569 |
Nfatc1 | Runx2 | ENSJJAP00000002500 | ENSJJAP00000019703 | Nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1. | Runt related transcription factor 2. | 0.417 |
Nfatc1 | Sp7 | ENSJJAP00000002500 | ENSJJAP00000013156 | Nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1. | Sp7 transcription factor 7. | 0.562 |
Nme8 | Ctnnb1 | ENSJJAP00000000298 | ENSJJAP00000013206 | NME/NM23 family member 8. | Catenin (cadherin associated protein), beta 1. | 0.611 |
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