STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CubnCubilin (intrinsic factor-cobalamin receptor). (3616 aa)    
Predicted Functional Partners:
Cblif
Cobalamin binding intrinsic factor.
    
 0.997
Amn
Amnionless.
   
 0.995
Gc
Vitamin D binding protein.
    
 0.915
ENSJJAP00000003817
annotation not available
    
 0.721
Met
Met proto-oncogene.
    
 0.721
Lrp2
Low density lipoprotein receptor-related protein 2.
   
 0.715
ENSJJAP00000010024
Apolipoprotein A-I Proapolipoprotein A-I Truncated apolipoprotein A-I.
     
 0.691
Kit
KIT proto-oncogene receptor tyrosine kinase.
    
 0.673
Gm19410
Predicted gene, 19410.
   
 0.670
Lgmn
Legumain.
     
 0.641
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.