STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tldc2TBC/LysM associated domain containing 2. (205 aa)    
Predicted Functional Partners:
Cdc16
CDC16 cell division cycle 16.
      
 0.570
Zfp185
Zinc finger protein 185.
      
 0.569
Atp6v1b2
ATPase, H+ transporting, lysosomal V1 subunit B2.
    
 
 0.512
Lrrc24
Leucine rich repeat containing 24.
      
 0.493
Lexm
Lymphocyte expansion molecule.
      
 0.485
Atp6v1d
ATPase, H+ transporting, lysosomal V1 subunit D.
    
 
 0.479
Apc2
Adenomatosis polyposis coli 2.
      
 0.456
Atp6v1a
ATPase, H+ transporting, lysosomal V1 subunit A.
    
 
 0.452
Atp6v1c1
ATPase, H+ transporting, lysosomal V1 subunit C1.
    
 
 0.452
ENSJJAP00000021276
annotation not available
      
 0.449
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.