STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Limd1LIM domains containing 1. (663 aa)    
Predicted Functional Partners:
Lats1
Large tumor suppressor.
    
 0.972
ENSJJAP00000012316
annotation not available
    
 0.953
ENSJJAP00000011706
annotation not available
   
 0.888
ENSJJAP00000017811
annotation not available
   
 0.888
Haus3
HAUS augmin-like complex, subunit 3.
   
 0.871
ENSJJAP00000018459
annotation not available
    
 
0.862
Haus8
4HAUS augmin-like complex, subunit 8.
    
 0.858
ENSJJAP00000011643
annotation not available
   
 0.818
ENSJJAP00000012333
annotation not available
   
 0.818
Rbm42
RNA binding motif protein 42.
    
 0.810
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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