Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atg5 | Atg7 | ENSJJAP00000012517 | ENSJJAP00000020652 | Autophagy related 5. | Autophagy related 7. | 0.954 |
Atg5 | Skor2 | ENSJJAP00000012517 | ENSJJAP00000009343 | Autophagy related 5. | SKI family transcriptional corepressor 2. | 0.442 |
Atg5 | Ubl3 | ENSJJAP00000012517 | ENSJJAP00000013927 | Autophagy related 5. | Ubiquitin-like 3. | 0.505 |
Atg7 | Atg5 | ENSJJAP00000020652 | ENSJJAP00000012517 | Autophagy related 7. | Autophagy related 5. | 0.954 |
Atg7 | Nedd8 | ENSJJAP00000020652 | ENSJJAP00000009340 | Autophagy related 7. | Neural precursor cell expressed, developmentally down-regulated gene 8. | 0.549 |
Atg7 | Ubl3 | ENSJJAP00000020652 | ENSJJAP00000013927 | Autophagy related 7. | Ubiquitin-like 3. | 0.478 |
Nedd8 | Atg7 | ENSJJAP00000009340 | ENSJJAP00000020652 | Neural precursor cell expressed, developmentally down-regulated gene 8. | Autophagy related 7. | 0.549 |
Nedd8 | Skor2 | ENSJJAP00000009340 | ENSJJAP00000009343 | Neural precursor cell expressed, developmentally down-regulated gene 8. | SKI family transcriptional corepressor 2. | 0.473 |
Nedd8 | Ubl3 | ENSJJAP00000009340 | ENSJJAP00000013927 | Neural precursor cell expressed, developmentally down-regulated gene 8. | Ubiquitin-like 3. | 0.521 |
Skor2 | Atg5 | ENSJJAP00000009343 | ENSJJAP00000012517 | SKI family transcriptional corepressor 2. | Autophagy related 5. | 0.442 |
Skor2 | Nedd8 | ENSJJAP00000009343 | ENSJJAP00000009340 | SKI family transcriptional corepressor 2. | Neural precursor cell expressed, developmentally down-regulated gene 8. | 0.473 |
Skor2 | Ubl3 | ENSJJAP00000009343 | ENSJJAP00000013927 | SKI family transcriptional corepressor 2. | Ubiquitin-like 3. | 0.551 |
Ubl3 | Atg5 | ENSJJAP00000013927 | ENSJJAP00000012517 | Ubiquitin-like 3. | Autophagy related 5. | 0.505 |
Ubl3 | Atg7 | ENSJJAP00000013927 | ENSJJAP00000020652 | Ubiquitin-like 3. | Autophagy related 7. | 0.478 |
Ubl3 | Nedd8 | ENSJJAP00000013927 | ENSJJAP00000009340 | Ubiquitin-like 3. | Neural precursor cell expressed, developmentally down-regulated gene 8. | 0.521 |
Ubl3 | Skor2 | ENSJJAP00000013927 | ENSJJAP00000009343 | Ubiquitin-like 3. | SKI family transcriptional corepressor 2. | 0.551 |