STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankrd27Ankyrin repeat domain 27 (VPS9 domain). (1048 aa)    
Predicted Functional Partners:
Vamp7
Mus musculus vesicle-associated membrane protein 7 (Vamp7), transcript variant 3, mRNA.
    
 0.967
ENSJJAP00000012045
annotation not available
    
 
 0.964
Rab21
RAB21, member RAS oncogene family.
   
 0.933
Rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.930
Rabep2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.930
Rab38
RAB38, member RAS oncogene family.
    
 
 0.883
ENSJJAP00000006015
annotation not available
   
 
 0.838
ENSJJAP00000023178
annotation not available
   
 
 0.838
ENSJJAP00000022981
annotation not available
   
 
 0.829
Eif2b2
Eukaryotic translation initiation factor 2B, subunit 2 beta.
    
   0.790
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.