STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trim21Tripartite motif-containing 21. (463 aa)    
Predicted Functional Partners:
Ro60
Ro60, Y RNA binding protein.
    
 0.933
Isg15
ISG15 ubiquitin-like modifier.
   
 0.916
Ddx41
DEAD (Asp-Glu-Ala-Asp) box polypeptide 41.
    
 0.865
ENSJJAP00000008422
annotation not available
    
 0.843
ENSJJAP00000003013
annotation not available
    
  0.833
ENSJJAP00000017071
annotation not available
   
 0.757
ENSJJAP00000014491
annotation not available
    
  0.745
ENSJJAP00000018911
annotation not available
    
  0.745
Ddx58
DEAD (Asp-Glu-Ala-Asp) box polypeptide 58.
   
 0.718
ENSJJAP00000007273
annotation not available
    
 0.718
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.