STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rcor1REST corepressor 1. (382 aa)    
Predicted Functional Partners:
Kdm1a
Lysine (K)-specific demethylase 1A.
    
 0.998
Hdac2
Histone deacetylase 2.
    
 0.989
Hmg20b
High mobility group 20B.
   
 0.982
Phf21a
PHD finger protein 21A.
   
 0.979
ENSJJAP00000019059
annotation not available
    
 0.974
ENSJJAP00000002636
annotation not available
    
 0.968
ENSJJAP00000020102
annotation not available
    
 0.968
ENSJJAP00000024921
annotation not available
    
 0.968
Trip4
Thyroid hormone receptor interactor 4.
    
   0.962
Med12
Mediator complex subunit 12.
    
 
 0.962
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.