STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scube2Signal peptide, CUB domain, EGF-like 2. (959 aa)    
Predicted Functional Partners:
Arid4b
AT rich interactive domain 4B (RBP1-like).
    
 0.796
ENSJJAP00000011957
annotation not available
   
 0.784
Rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.749
Mmp9
Matrix metallopeptidase 9.
   
 0.715
Ush1c
USH1 protein network component harmonin.
    
 
 0.640
Adamts18
A disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18.
   
 0.640
Hivep3
Human immunodeficiency virus type I enhancer binding protein 3.
    
 0.632
ENSJJAP00000001436
annotation not available
   
 
 0.628
Wdr90
WD repeat domain 90.
    
 0.620
Ptk7
PTK7 protein tyrosine kinase 7.
    
  0.620
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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