STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc39Coiled-coil domain containing 39. (913 aa)    
Predicted Functional Partners:
Ift122
Intraflagellar transport 122.
   
 
 0.832
Fam227a
Family with sequence similarity 227, member A.
   
    0.779
Ccdc65
Coiled-coil domain containing 65.
   
 
 0.717
Dnali1
Dynein, axonemal, light intermediate polypeptide 1.
    
 
 0.695
Armc4
Armadillo repeat containing 4.
   
 
 0.690
ENSJJAP00000010837
annotation not available
    
 
 0.685
Ccno
Cyclin O.
    
 0.657
Lrrc6
Leucine rich repeat containing 6 (testis).
   
 
 0.649
Qrich2
Glutamine rich 2.
    
 0.639
Nme8
NME/NM23 family member 8.
   
 
 0.635
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.