STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmx3H6 homeobox 3. (358 aa)    
Predicted Functional Partners:
Isy1
ISY1 splicing factor homolog.
    
   0.914
Ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.914
ENSJJAP00000016865
annotation not available
    
   0.790
ENSJJAP00000021198
annotation not available
    
   0.790
Dtnb
Dystrobrevin, beta.
   
   0.771
ENSJJAP00000018464
annotation not available
   
   0.771
ENSJJAP00000018714
annotation not available
   
   0.771
Tbx1
T-box 1.
    
 
 0.735
Tbx15
T-box 15.
    
 
 0.594
Tbx22
T-box 22.
    
 
 0.594
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.