STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000014980annotation not available (144 aa)    
Predicted Functional Partners:
Nat10
N-acetyltransferase 10.
   
 0.891
Trub1
TruB pseudouridine (psi) synthase family member 1.
   
 
 0.737
Fdxacb1
Ferredoxin-fold anticodon binding domain containing 1.
  
 
 0.727
Dus2
Dihydrouridine synthase 2.
  
 
 0.708
Trmt1l
tRNA methyltransferase 1 like.
    
 
 0.630
Trmt1
tRNA methyltransferase 1.
    
 
 0.630
Pus1
Pseudouridine synthase 1.
   
 
 0.514
ENSJJAP00000004039
annotation not available
   
 
 0.492
ENSJJAP00000005135
annotation not available
   
 
 0.492
Pus3
Pseudouridine synthase 3.
   
 
 0.473
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.