STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Crb1Crumbs family member 1, photoreceptor morphogenesis associated. (1405 aa)    
Predicted Functional Partners:
Mpp5
Membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5).
    
 0.980
Crb2
Crumbs family member 2.
   
0.890
ENSJJAP00000011957
annotation not available
   
 0.784
Rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.749
Frmd6
FERM domain containing 6.
    
 0.681
Patj
PATJ, crumbs cell polarity complex component.
    
 
 0.679
Notch1
Notch 1.
   
0.651
Wdr90
WD repeat domain 90.
    
 0.620
Ptk7
PTK7 protein tyrosine kinase 7.
    
  0.620
ENSJJAP00000005757
annotation not available
    
 0.614
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.