STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Foxf1Forkhead box F1. (381 aa)    
Predicted Functional Partners:
Suox
Sulfite oxidase.
     
 0.776
Sgk3
Serum/glucocorticoid regulated kinase 3.
    
 0.733
ENSJJAP00000017661
annotation not available
    
 0.717
Bmp4
Bone morphogenetic protein 4.
     
 0.716
Shh
Sonic hedgehog.
     
 0.714
Ihh
Indian hedgehog.
     
 0.613
Tmem173
Transmembrane protein 173.
    
  0.587
Gli3
GLI-Kruppel family member GLI3.
    
 0.582
Crebbp
CREB binding protein.
    
 0.580
Cenpp
Centromere protein P.
    
 0.580
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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