STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000016087annotation not available (150 aa)    
Predicted Functional Partners:
Slu7
SLU7 splicing factor homolog (S. cerevisiae).
    
 0.897
Ppil1
Peptidylprolyl isomerase (cyclophilin)-like 1.
  
 
0.844
Prpf19
pre-mRNA processing factor 19.
    
 0.820
Crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.817
ENSJJAP00000014627
annotation not available
   
 0.815
Cdc40
Cell division cycle 40.
    
 0.814
Syf2
SYF2 homolog, RNA splicing factor (S. cerevisiae).
    
 0.814
Xab2
XPA binding protein 2.
    
 0.813
Snw1
SNW domain containing 1.
    
 0.813
ENSJJAP00000018628
annotation not available
    
 0.812
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.