STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam185aFamily with sequence similarity 185, member A. (379 aa)    
Predicted Functional Partners:
Pex13
Peroxisomal biogenesis factor 13.
   
 0.994
Pex7
Peroxisomal biogenesis factor 7.
    
 0.980
ENSJJAP00000010403
annotation not available
    
 0.973
ENSJJAP00000012064
annotation not available
    
 0.970
ENSJJAP00000021948
annotation not available
    
 0.970
ENSJJAP00000002484
annotation not available
    
 0.969
Hsdl2
Hydroxysteroid dehydrogenase like 2.
    
 0.968
ENSJJAP00000007930
annotation not available
    
  0.959
Ephx2
Epoxide hydrolase 2, cytoplasmic.
   
 
  0.957
Pex6
Peroxisomal biogenesis factor 6.
    
 0.955
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.