STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000016780annotation not available (325 aa)    
Predicted Functional Partners:
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 
 0.778
Pitx3
Paired-like homeodomain transcription factor 3.
  
 
  
0.775
Pou1f1
POU domain, class 1, transcription factor 1.
   
 
 0.575
Foxc2
Forkhead box C2.
    
 
 0.538
Lhx4
LIM homeobox protein 4.
   
  
 0.497
ENSJJAP00000012923
annotation not available
    
 
 0.482
Cyp1b1
Cytochrome P450, family 1, subfamily b, polypeptide 1.
      
 0.480
Mcm6
Minichromosome maintenance complex component 6.
      
 0.469
Osr2
Odd-skipped related 2.
    
 
 0.466
Lef1
Lymphoid enhancer binding factor 1.
    
 
 0.456
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.