STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ebf2Early B cell factor 2. (575 aa)    
Predicted Functional Partners:
Ufd1
Ubiquitin recognition factor in ER-associated degradation 1.
    
 
 0.771
Yod1
YOD1 deubiquitinase.
    
   0.760
Plaa
Phospholipase A2, activating protein.
    
   0.760
Pparg
Peroxisome proliferator activated receptor gamma.
     
 0.709
Spata5
Spermatogenesis associated 5.
   
 0.633
Vcp
Valosin containing protein.
    
 0.627
Zfp423
Zinc finger protein 423.
    
 
 0.597
Paqr9
Progestin and adipoQ receptor family member IX.
      
 0.570
Prdm16
PR domain containing 16.
    
 
 0.547
Ebf3
Early B cell factor 3.
  
  
0.537
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.