STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slco4a1Solute carrier organic anion transporter family, member 4a1. (724 aa)    
Predicted Functional Partners:
Efcab9
EF-hand calcium binding domain 9.
   
 
 0.726
Catsper1
Cation channel, sperm associated 1.
    
 
 0.687
ENSJJAP00000023730
annotation not available
    
 
 0.684
Gm20498
Predicted gene 20498.
    
   0.676
Catsper3
Cation channel, sperm associated 3.
    
   0.671
Catsper2
Cation channel, sperm associated 2.
    
   0.671
Slc16a10
Solute carrier family 16 (monocarboxylic acid transporters), member 10.
   
 
 0.584
Slc16a2
Solute carrier family 16 (monocarboxylic acid transporters), member 2.
   
 
 0.549
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.