STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000017177annotation not available (193 aa)    
Predicted Functional Partners:
Pou5f1
POU domain, class 5, transcription factor 1.
   
 0.734
Snrpd3
Small nuclear ribonucleoprotein D3.
   
 0.685
ENSJJAP00000013735
annotation not available
   
 0.667
Sympk
Symplekin.
    
 0.641
Ncbp2
Nuclear cap binding protein subunit 2.
   
  0.637
ENSJJAP00000000092
annotation not available
   
 0.626
Nanog
Nanog homeobox.
   
 
 0.618
Snrpd1
Small nuclear ribonucleoprotein D1.
    
  0.610
Snrpd2
Small nuclear ribonucleoprotein D2.
    
  0.609
Polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
  
 
 0.607
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.