STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cacng1Calcium channel, voltage-dependent, gamma subunit 1. (224 aa)    
Predicted Functional Partners:
ENSJJAP00000016151
annotation not available
   
 0.995
Cacna2d1
Calcium channel, voltage-dependent, alpha2/delta subunit 1.
    
 0.995
Cacnb1
Calcium channel, voltage-dependent, beta 1 subunit.
   
 0.991
Cacna2d2
Calcium channel, voltage-dependent, alpha 2/delta subunit 2.
    
 0.989
Cacna1d
Calcium channel, voltage-dependent, L type, alpha 1D subunit.
   
 0.984
Cacna2d4
Calcium channel, voltage-dependent, alpha 2/delta subunit 4.
    
 0.975
Cacna2d3
Calcium channel, voltage-dependent, alpha2/delta subunit 3.
    
 0.975
Cacna1c
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
   
 0.973
ENSJJAP00000001509
annotation not available
   
 0.969
Cacnb4
Calcium channel, voltage-dependent, beta 4 subunit.
   
 0.966
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.