STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000017506annotation not available (370 aa)    
Predicted Functional Partners:
Bcas3
Breast carcinoma amplified sequence 3.
   
 
 0.884
Rad21
RAD21 cohesin complex component.
 
      0.552
Appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
   0.489
ENSJJAP00000019663
annotation not available
    
   0.489
Cask
Calcium/calmodulin-dependent serine protein kinase (MAGUK family).
      
 0.457
Kif17
Kinesin family member 17.
      
 0.456
Lin7a
Lin-7 homolog A (C. elegans).
      
 0.456
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.