STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pus7Pseudouridylate synthase 7. (619 aa)    
Predicted Functional Partners:
Noc3l
NOC3 like DNA replication regulator.
   
   0.956
Mrpl13
Mitochondrial ribosomal protein L13.
   
   0.927
Mtg1
Mitochondrial ribosome-associated GTPase 1.
   
   0.926
Mrpl17
Mitochondrial ribosomal protein L17.
  
   0.926
Mrm3
Mitochondrial rRNA methyltransferase 3.
   
   0.925
Mrpl21
Mitochondrial ribosomal protein L21.
  
   0.924
Mrpl11
Mitochondrial ribosomal protein L11.
   
   0.918
Mrpl43
Mitochondrial ribosomal protein L43.
   
   0.918
Mrpl24
Mitochondrial ribosomal protein L24.
   
   0.917
Mrpl3
Mitochondrial ribosomal protein L3.
    
   0.916
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.