STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sez6Seizure related gene 6. (949 aa)    
Predicted Functional Partners:
Ap2m1
Adaptor-related protein complex 2, mu 1 subunit.
    
  0.708
Pla2g4a
Phospholipase A2, group IVA (cytosolic, calcium-dependent).
    
 0.696
ENSJJAP00000002484
annotation not available
    
  0.695
Wdr90
WD repeat domain 90.
    
 0.669
Mpdz
Multiple PDZ domain protein.
    
 0.662
Phf12
PHD finger protein 12.
 
  
 
 0.661
ENSJJAP00000007214
annotation not available
   
 0.647
Ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
    
  0.619
Ap2a2
Adaptor-related protein complex 2, alpha 2 subunit.
    
  0.619
Mars
methionine-tRNA synthetase.
   
 0.582
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.