STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam117bFamily with sequence similarity 117, member B. (591 aa)    
Predicted Functional Partners:
Dyrk1a
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a.
    
 
 0.864
Dyrk1b
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b.
    
 
 0.688
Dcaf7
DDB1 and CUL4 associated factor 7.
    
 
 0.655
Efcab11
EF-hand calcium binding domain 11.
      
 0.540
Rbm43
RNA binding motif protein 43.
   
  
 0.511
Rnf169
Ring finger protein 169.
      
 0.465
ENSJJAP00000008994
annotation not available
    
 
 0.463
Traf3
TNF receptor-associated factor 3.
      
 0.461
Mcmbp
Minichromosome maintenance complex binding protein.
      
 0.457
Kdm5b
Lysine (K)-specific demethylase 5B.
      
 0.455
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.