STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RargRetinoic acid receptor, gamma. (458 aa)    
Predicted Functional Partners:
Rxrb
Retinoid X receptor beta.
   
0.941
Rxra
Retinoid X receptor alpha.
   
0.932
Rxrg
Retinoid X receptor gamma.
   
0.927
ENSJJAP00000006259
annotation not available
    
 0.920
Pml
Promyelocytic leukemia.
    
 0.892
Med1
Mediator complex subunit 1.
    
 0.876
Rara
Retinoic acid receptor, alpha.
  
0.868
Ncor2
Nuclear receptor co-repressor 2.
    
 0.856
Ncoa1
Nuclear receptor coactivator 1.
    
 0.839
Zbtb16
Zinc finger and BTB domain containing 16.
    
 0.830
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.