STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Alkbh6alkB homolog 6. (238 aa)    
Predicted Functional Partners:
Med29
Mediator complex subunit 29.
    
 
 0.923
Alkbh7
alkB homolog 7.
   
  
 0.601
Rsu1
Ras suppressor protein 1.
      
 0.570
Alkbh1
alkB homolog 1, histone H2A dioxygenase.
   
  
 0.570
Alkbh4
alkB homolog 4, lysine demethylase.
      
 0.570
Vps51
VPS51 GARP complex subunit.
      
 0.527
Jmjd4
Jumonji domain containing 4.
      
 0.514
ENSJJAP00000016856
annotation not available
      
 0.509
Rnf121
Ring finger protein 121.
      
 0.501
Brd7
Bromodomain containing 7.
      
 0.459
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.