STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cacng4Calcium channel, voltage-dependent, gamma subunit 4. (327 aa)    
Predicted Functional Partners:
Cacng1
Calcium channel, voltage-dependent, gamma subunit 1.
 
   
 0.928
Gria2
Glutamate receptor, ionotropic, AMPA2 (alpha 2).
   
 0.886
Cacnb1
Calcium channel, voltage-dependent, beta 1 subunit.
     
 0.868
Cacna1d
Calcium channel, voltage-dependent, L type, alpha 1D subunit.
     
 0.853
Cacng7
Calcium channel, voltage-dependent, gamma subunit 7.
  
  
0.850
Camk2a
Calcium/calmodulin-dependent protein kinase II alpha.
   
 
 0.850
ENSJJAP00000013642
annotation not available
   
 
 0.847
Ppp2r2d
Protein phosphatase 2, regulatory subunit B, delta.
    
  0.843
Cacna1e
Calcium channel, voltage-dependent, R type, alpha 1E subunit.
     
 0.843
Ppp2r2c
Protein phosphatase 2, regulatory subunit B, gamma.
    
  0.843
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.