STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dcaf15DDB1 and CUL4 associated factor 15. (601 aa)    
Predicted Functional Partners:
Ddb1
Damage specific DNA binding protein 1.
    
 
 0.982
Dda1
DET1 and DDB1 associated 1.
    
 
 0.974
ENSJJAP00000014217
annotation not available
    
 
 0.861
ENSJJAP00000018196
annotation not available
    
 
 0.861
ENSJJAP00000023497
annotation not available
    
 
 0.861
ENSJJAP00000023639
annotation not available
    
 
 0.861
Cul4a
Cullin 4A.
    
 
 0.785
Cul4b
Cullin 4B.
    
 
 0.614
Cisd3
CDGSH iron sulfur domain 3.
   
  
 0.584
Ndufs5
NADH:ubiquinone oxidoreductase core subunit S5.
   
   0.529
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.