STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Htra4HtrA serine peptidase 4. (487 aa)    
Predicted Functional Partners:
ENSJJAP00000010403
annotation not available
    
 0.963
Xiap
X-linked inhibitor of apoptosis.
    
 0.935
Pink1
PTEN induced putative kinase 1.
    
 0.881
Birc6
Baculoviral IAP repeat-containing 6.
    
 0.872
Psmc6
Proteasome (prosome, macropain) 26S subunit, ATPase, 6.
    
 0.851
Psmc4
Proteasome (prosome, macropain) 26S subunit, ATPase, 4.
    
 0.851
Psmc3
Proteasome (prosome, macropain) 26S subunit, ATPase 3.
    
 0.851
ENSJJAP00000007225
annotation not available
    
   0.842
Katnal2
Katanin p60 subunit A-like 2.
   
 0.838
Prkn
Parkin RBR E3 ubiquitin protein ligase.
    
 0.836
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.