STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NfrkbNuclear factor related to kappa B binding protein. (1299 aa)    
Predicted Functional Partners:
Actr5
ARP5 actin-related protein 5.
   
 0.997
Ino80e
INO80 complex subunit E.
    
 0.994
Uchl5
Ubiquitin carboxyl-terminal esterase L5.
    
 0.983
Ruvbl1
RuvB-like protein 1.
    
 0.976
Mcrs1
Microspherule protein 1.
    
 0.974
Actr8
ARP8 actin-related protein 8.
   
 0.973
Bap1
Brca1 associated protein 1.
    
 0.969
Ino80c
INO80 complex subunit C.
    
 0.943
Tfpt
TCF3 (E2A) fusion partner.
    
 0.938
Ino80b
INO80 complex subunit B.
    
 0.914
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.