STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcmf1Potassium channel modulatory factor 1. (375 aa)    
Predicted Functional Partners:
Ubr4
Ubiquitin protein ligase E3 component n-recognin 4.
    
 
 0.973
ENSJJAP00000018680
annotation not available
   
    0.691
ENSJJAP00000019701
annotation not available
   
    0.691
Thsd7a
Thrombospondin, type I, domain containing 7A.
      
 0.521
Cul3
Cullin 3.
   
  
 0.516
Ube3c
Ubiquitin protein ligase E3C.
   
  
 0.488
Cst9
Cystatin 9.
    
   0.474
Ubr1
Ubiquitin protein ligase E3 component n-recognin 1.
      
 0.456
Sars2
seryl-aminoacyl-tRNA synthetase 2.
    
   0.454
Vegfd
Vascular endothelial growth factor D.
    
   0.451
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.