STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abca1ATP-binding cassette, sub-family A (ABC1), member 1. (2261 aa)    
Predicted Functional Partners:
ENSJJAP00000010024
Apolipoprotein A-I Proapolipoprotein A-I Truncated apolipoprotein A-I.
    
 0.965
Nr1h2
Nuclear receptor subfamily 1, group H, member 2.
    
 0.909
Nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.869
Apoa4
Apolipoprotein A-IV.
    
 0.803
Rxra
Retinoid X receptor alpha.
    
 0.758
Nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.689
Rxrg
Retinoid X receptor gamma.
    
 0.664
Abca3
ATP-binding cassette, sub-family A (ABC1), member 3.
  
 
0.639
ENSJJAP00000024321
annotation not available
  
 
0.637
Rxrb
Retinoid X receptor beta.
    
 0.632
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.