STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yme1l1YME1-like 1 (S. cerevisiae). (496 aa)    
Predicted Functional Partners:
Timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
    
   0.962
Ndufa13
NADH:ubiquinone oxidoreductase subunit A13.
   
   0.962
Stoml2
Stomatin (Epb7.2)-like 2.
  
 0.898
Clpx
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
  
  
 0.898
Parl
Presenilin associated, rhomboid-like.
  
 
 0.853
Mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.848
ENSJJAP00000004433
annotation not available
  
 0.846
ENSJJAP00000005125
annotation not available
  
 0.846
ENSJJAP00000017010
annotation not available
  
 0.838
ENSJJAP00000019828
annotation not available
  
 0.838
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.