STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nhej1Non-homologous end joining factor 1. (171 aa)    
Predicted Functional Partners:
Lig4
Ligase IV, DNA, ATP-dependent.
    
 0.993
ENSJJAP00000000946
annotation not available
    
 0.986
Xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 0.986
Gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.891
Dclre1c
DNA cross-link repair 1C.
   
 
 0.833
Lig3
Ligase III, DNA, ATP-dependent.
    
 0.794
Lig1
Ligase I, DNA, ATP-dependent.
    
 0.794
Xrcc4
X-ray repair complementing defective repair in Chinese hamster cells 4.
     
 0.789
Poll
Polymerase (DNA directed), lambda.
     
 0.762
Polm
Polymerase (DNA directed), mu.
     
 0.728
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.