STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cln5Ceroid-lipofuscinosis, neuronal 5. (208 aa)    
Predicted Functional Partners:
Cln6
Ceroid-lipofuscinosis, neuronal 6.
  
   
 0.688
Cln3
Ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease).
    
 
 0.642
Ctsh
Cathepsin H.
      
 0.570
Mfsd8
Major facilitator superfamily domain containing 8.
      
 0.570
Cln8
Ceroid-lipofuscinosis, neuronal 8.
      
 0.570
Ppt1
Palmitoyl-protein thioesterase 1.
      
 0.570
Anpep
Alanyl (membrane) aminopeptidase.
      
 0.570
ENSJJAP00000000935
annotation not available
      
 0.548
Tpp1
Tripeptidyl peptidase I.
      
 0.548
Myh9
Myosin, heavy polypeptide 9, non-muscle.
      
 0.534
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.