STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LdhbLactate dehydrogenase B. (334 aa)    
Predicted Functional Partners:
Got1
Glutamic-oxaloacetic transaminase 1, soluble.
   
 0.946
Got2
Glutamatic-oxaloacetic transaminase 2, mitochondrial.
   
 0.946
Pklr
Pyruvate kinase liver and red blood cell.
  
 0.924
Gpi1
Glucose phosphate isomerase 1.
  
 
 0.917
Pcx
Pyruvate carboxylase.
  
 0.917
ENSJJAP00000002611
annotation not available
  
 0.915
ENSJJAP00000003840
annotation not available
  
 0.915
H6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 
 0.915
Ldhc
Lactate dehydrogenase C.
  
  
0.908
Tsg101
Tumor susceptibility gene 101.
 
 
  
 0.905
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.