STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trpc6Transient receptor potential cation channel, subfamily C, member 6. (931 aa)    
Predicted Functional Partners:
Trpc1
Transient receptor potential cation channel, subfamily C, member 1.
  
 
0.911
Trpc3
Transient receptor potential cation channel, subfamily C, member 3.
  
 
0.900
Bmpr2
Bone morphogenetic protein receptor, type II (serine/threonine kinase).
    
 0.869
Prkg1
Protein kinase, cGMP-dependent, type I.
     
 0.854
Prkg2
Protein kinase, cGMP-dependent, type II.
     
 0.844
Stim1
Stromal interaction molecule 1.
    
 0.823
Trpc7
Transient receptor potential cation channel, subfamily C, member 7.
  
 
0.808
Stim2
Stromal interaction molecule 2.
    
 0.804
Trpc5
Transient receptor potential cation channel, subfamily C, member 5.
  
 
0.771
Trpc4
Transient receptor potential cation channel, subfamily C, member 4.
  
 
0.731
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.