STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf20Ring finger protein 20. (974 aa)    
Predicted Functional Partners:
Rnf40
Ring finger protein 40.
  
0.994
Leo1
Leo1, Paf1/RNA polymerase II complex component.
   
 0.986
ENSJJAP00000005742
annotation not available
    
 0.920
ENSJJAP00000010144
annotation not available
    
 0.920
ENSJJAP00000012668
annotation not available
    
 0.920
ENSJJAP00000019928
annotation not available
    
 0.920
Paf1
Paf1, RNA polymerase II complex component.
    
 0.906
Cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component.
   
 0.906
ENSJJAP00000000109
annotation not available
   
 0.879
ENSJJAP00000007692
annotation not available
   
 0.879
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.