STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpm1Tropomyosin 1, alpha. (326 aa)    
Predicted Functional Partners:
Myl1
Myosin, light polypeptide 1.
   
 0.966
Tnni3
Troponin I, cardiac 3.
   
 0.965
Acta1
Actin, alpha 1, skeletal muscle.
   
 0.965
Actc1
Actin, alpha, cardiac muscle 1.
   
 0.943
Tnnt2
Troponin T2, cardiac.
   
 0.931
Mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.900
Tpm2
Tropomyosin 2, beta.
  
 
0.873
Tpm3
Tropomyosin 3, gamma.
  
 
0.869
Myh4
Myosin, heavy polypeptide 4, skeletal muscle.
   
 0.866
Tnnt1
Troponin T1, skeletal, slow.
   
 0.859
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.