STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000022893annotation not available (315 aa)    
Predicted Functional Partners:
Ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
   
 0.980
Sart1
Squamous cell carcinoma antigen recognized by T cells 1.
   
 
 0.978
Snrpa1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.975
Luc7l
Luc7-like.
   
 0.975
Luc7l2
LUC7-like 2 (S. cerevisiae).
   
 0.975
Srrm1
Serine/arginine repetitive matrix 1.
   
 0.974
U2af2
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2.
   
 
 0.972
Prpf40b
pre-mRNA processing factor 40B.
   
 
 0.969
Ncbp2
Nuclear cap binding protein subunit 2.
   
 
 0.967
ENSJJAP00000006614
annotation not available
   
 0.961
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.