STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SprtnSprT-like N-terminal domain. (483 aa)    
Predicted Functional Partners:
Pten
Phosphatase and tensin homolog.
   
    0.977
Vcp
Valosin containing protein.
   
 0.964
Ppp2r3a
Protein phosphatase 2, regulatory subunit B'', alpha.
   
    0.947
Spata5
Spermatogenesis associated 5.
   
 0.928
ENSJJAP00000008422
annotation not available
    
  0.907
Ufd1
Ubiquitin recognition factor in ER-associated degradation 1.
    
 0.903
Rfc1
Replication factor C (activator 1) 1.
   
 0.883
Rfc5
Replication factor C (activator 1) 5.
   
 0.881
Rfc4
Replication factor C (activator 1) 4.
   
 0.871
Polh
Polymerase (DNA directed), eta (RAD 30 related).
   
 0.871
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.