Pax1 protein (Jaculus jaculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Pax1

Paired box 1. (466 aa)

Predicted Functional Partners:

Meox2

0.578

Meox1

0.566

Msx1

0.555

Hoxb1

0.553

Gata1

0.529

Lmo2

0.517

Ldb1

0.513

Hoxa3

0.506

Tfcp2

0.496

Nfe2

0.489

Your Current Organism:

Jaculus jaculus

NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gata1	Ldb1	ENSJJAP00000004268	ENSJJAP00000008055	GATA binding protein 1.	LIM domain binding 1.	0.857
Gata1	Lmo2	ENSJJAP00000004268	ENSJJAP00000020060	GATA binding protein 1.	LIM domain only 2.	0.990
Gata1	Nfe2	ENSJJAP00000004268	ENSJJAP00000006742	GATA binding protein 1.	Nuclear factor, erythroid derived 2.	0.643
Gata1	Pax1	ENSJJAP00000004268	ENSJJAP00000023403	GATA binding protein 1.	Paired box 1.	0.529
Gata1	Tfcp2	ENSJJAP00000004268	ENSJJAP00000017591	GATA binding protein 1.	Transcription factor CP2.	0.512
Hoxa3	Pax1	ENSJJAP00000010389	ENSJJAP00000023403	Homeobox A3.	Paired box 1.	0.506
Hoxb1	Pax1	ENSJJAP00000001176	ENSJJAP00000023403	Homeobox B1.	Paired box 1.	0.553
Ldb1	Gata1	ENSJJAP00000008055	ENSJJAP00000004268	LIM domain binding 1.	GATA binding protein 1.	0.857
Ldb1	Lmo2	ENSJJAP00000008055	ENSJJAP00000020060	LIM domain binding 1.	LIM domain only 2.	0.992
Ldb1	Pax1	ENSJJAP00000008055	ENSJJAP00000023403	LIM domain binding 1.	Paired box 1.	0.513
Ldb1	Tfcp2	ENSJJAP00000008055	ENSJJAP00000017591	LIM domain binding 1.	Transcription factor CP2.	0.475
Lmo2	Gata1	ENSJJAP00000020060	ENSJJAP00000004268	LIM domain only 2.	GATA binding protein 1.	0.990
Lmo2	Ldb1	ENSJJAP00000020060	ENSJJAP00000008055	LIM domain only 2.	LIM domain binding 1.	0.992
Lmo2	Pax1	ENSJJAP00000020060	ENSJJAP00000023403	LIM domain only 2.	Paired box 1.	0.517
Lmo2	Tfcp2	ENSJJAP00000020060	ENSJJAP00000017591	LIM domain only 2.	Transcription factor CP2.	0.535
Meox1	Meox2	ENSJJAP00000013264	ENSJJAP00000004183	Mesenchyme homeobox 1.	Mesenchyme homeobox 2.	0.742
Meox1	Pax1	ENSJJAP00000013264	ENSJJAP00000023403	Mesenchyme homeobox 1.	Paired box 1.	0.566
Meox2	Meox1	ENSJJAP00000004183	ENSJJAP00000013264	Mesenchyme homeobox 2.	Mesenchyme homeobox 1.	0.742
Meox2	Pax1	ENSJJAP00000004183	ENSJJAP00000023403	Mesenchyme homeobox 2.	Paired box 1.	0.578
Msx1	Pax1	ENSJJAP00000018296	ENSJJAP00000023403	Msh homeobox 1.	Paired box 1.	0.555