Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
1810010H24Rik | Actl6a | ENSJJAP00000023422 | ENSJJAP00000015735 | RIKEN cDNA 1810010H24 gene. | Actin-like 6A. | 0.915 |
1810010H24Rik | Arid1a | ENSJJAP00000023422 | ENSJJAP00000016062 | RIKEN cDNA 1810010H24 gene. | AT rich interactive domain 1A (SWI-like). | 0.808 |
1810010H24Rik | Arid1b | ENSJJAP00000023422 | ENSJJAP00000023395 | RIKEN cDNA 1810010H24 gene. | AT rich interactive domain 1B (SWI-like). | 0.808 |
1810010H24Rik | ENSJJAP00000022986 | ENSJJAP00000023422 | ENSJJAP00000022986 | RIKEN cDNA 1810010H24 gene. | annotation not available | 0.794 |
1810010H24Rik | Mysm1 | ENSJJAP00000023422 | ENSJJAP00000014058 | RIKEN cDNA 1810010H24 gene. | Myb-like, SWIRM and MPN domains 1. | 0.913 |
1810010H24Rik | Pbrm1 | ENSJJAP00000023422 | ENSJJAP00000017917 | RIKEN cDNA 1810010H24 gene. | Polybromo 1. | 0.910 |
1810010H24Rik | Phf10 | ENSJJAP00000023422 | ENSJJAP00000005037 | RIKEN cDNA 1810010H24 gene. | PHD finger protein 10. | 0.876 |
1810010H24Rik | Smarcb1 | ENSJJAP00000023422 | ENSJJAP00000005334 | RIKEN cDNA 1810010H24 gene. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1. | 0.917 |
1810010H24Rik | Smarcc2 | ENSJJAP00000023422 | ENSJJAP00000005976 | RIKEN cDNA 1810010H24 gene. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. | 0.794 |
1810010H24Rik | Smarce1 | ENSJJAP00000023422 | ENSJJAP00000023374 | RIKEN cDNA 1810010H24 gene. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. | 0.898 |
Actl6a | 1810010H24Rik | ENSJJAP00000015735 | ENSJJAP00000023422 | Actin-like 6A. | RIKEN cDNA 1810010H24 gene. | 0.915 |
Actl6a | Arid1a | ENSJJAP00000015735 | ENSJJAP00000016062 | Actin-like 6A. | AT rich interactive domain 1A (SWI-like). | 0.997 |
Actl6a | Arid1b | ENSJJAP00000015735 | ENSJJAP00000023395 | Actin-like 6A. | AT rich interactive domain 1B (SWI-like). | 0.987 |
Actl6a | ENSJJAP00000022986 | ENSJJAP00000015735 | ENSJJAP00000022986 | Actin-like 6A. | annotation not available | 0.993 |
Actl6a | Mysm1 | ENSJJAP00000015735 | ENSJJAP00000014058 | Actin-like 6A. | Myb-like, SWIRM and MPN domains 1. | 0.987 |
Actl6a | Pbrm1 | ENSJJAP00000015735 | ENSJJAP00000017917 | Actin-like 6A. | Polybromo 1. | 0.997 |
Actl6a | Phf10 | ENSJJAP00000015735 | ENSJJAP00000005037 | Actin-like 6A. | PHD finger protein 10. | 0.996 |
Actl6a | Smarcb1 | ENSJJAP00000015735 | ENSJJAP00000005334 | Actin-like 6A. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1. | 0.997 |
Actl6a | Smarcc2 | ENSJJAP00000015735 | ENSJJAP00000005976 | Actin-like 6A. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. | 0.997 |
Actl6a | Smarce1 | ENSJJAP00000015735 | ENSJJAP00000023374 | Actin-like 6A. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. | 0.997 |
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