STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pkd2Polycystin 2, transient receptor potential cation channel. (967 aa)    
Predicted Functional Partners:
Pkd1
Polycystin 1, transient receptor poteintial channel interacting.
    
0.991
Pkd1l3
Polycystic kidney disease 1 like 3.
    
0.955
Pkd1l2
Polycystic kidney disease 1 like 2.
    
0.946
Pkdrej
Polycystin (PKD) family receptor for egg jelly.
    
0.835
Exoc5
Exocyst complex component 5.
     
 0.778
Rho
Rhodopsin.
     
 0.711
Trpc1
Transient receptor potential cation channel, subfamily C, member 1.
    
 
 0.696
Exoc4
Exocyst complex component 4.
     
 0.659
ENSJJAP00000019953
annotation not available
     
 0.644
ENSJJAP00000015835
annotation not available
     
 0.642
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.