STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm12248Predicted gene 12248. (331 aa)    
Predicted Functional Partners:
Sc5d
sterol-C5-desaturase.
   
 0.998
Cyp51
Cytochrome P450, family 51.
  
 0.996
Sqle
Squalene epoxidase.
   
 0.995
Sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.990
Hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 0.989
Fdft1
Farnesyl diphosphate farnesyl transferase 1.
  
 0.986
Cyp7b1
Cytochrome P450, family 7, subfamily b, polypeptide 1.
  
 0.985
Cyp7a1
Cytochrome P450, family 7, subfamily a, polypeptide 1.
  
 0.980
Cyp39a1
Cytochrome P450, family 39, subfamily a, polypeptide 1.
  
 0.980
Nsdhl
NAD(P) dependent steroid dehydrogenase-like.
  
 0.976
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.