STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PtprkProtein tyrosine phosphatase, receptor type, K. (1457 aa)    
Predicted Functional Partners:
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.849
Ptk7
PTK7 protein tyrosine kinase 7.
    
 0.774
Jup
Junction plakoglobin.
    
 0.768
Lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1.
    
  0.713
Egfr
Epidermal growth factor receptor.
   
 0.713
Lrit3
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3.
    
  0.713
Grb2
Growth factor receptor bound protein 2.
   
 0.712
Myo9b
Myosin IXb.
     
 0.710
Myo9a
Myosin IXa.
     
 0.708
ENSJJAP00000005804
annotation not available
    
  0.697
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.